It facilitates a clean and intuitive interface for task control and project management, along with modules that allow raw data import and processing, peak detection, identification and list alignment, visualization, and normalization. Analyze mass-spectrometry data in a Java interfaceĪfter downloading the archive, you can unzip the contents and double-click the. When starting a new project, you can setup the parameters and values or import them from external files in TXT or CSV format.Ī command-line window must remain active in the background in order to be able to work with the GUI. Configure peak detection settings and explore visualization modes A batch mode is available for this purpose and other components, such as gap filling, mass detection, duplicate peak filter, online database search, and formula prediction. Peak detection settings can be configured for mass, FTMS shoulder peaks filter, chromatogram builder, GridMass 2D, MS/MS peak list builder, or targeted mode. When it comes to the peak list modes, you can customize options for order peak lists, gap filling, isotopes, filtering, data analysis, export and import, among others.Īs far as visualization goes, it's possible to opt for TIC/XIC, Spectra, 2D or 3D, MS/MS or neutral loss visualizer. Comprehensive tool for mass-spectrometry data analysis Scatter, histogram and peak intensity plots are put at your disposal too.

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